At the last USTFCCCA meeting there was a lot of concern within the NCAA coaches community that NCAA meets will no longer be able to count for qualifying for the US Championships and World Championships, but it's stuff like this that seems to be the problem. If the NCAA doesn't conform to WA and USATF rules then that's exactly what's going to happen. The NCAA needs to conform to the WA standards and that includes foot wear and it needs to be enforced by the NCAA. It's not up to WA to have to go and review every result and every athlete's shoes, if that continues to be an issue then WA will surely just drop all NCAA results from their rankings, which likely means NCAA results will no longer be able to be used for qualifying for the US Champs either.
The fact that stuff like this was still happening this last spring kind of baffles a little bit. Was this just one ignorant athlete (and coach)? Or is the NCAA trying to play chicken with USATF and WA? Keep in mind there is a lot at stake here, a significant number of athletes from other countries qualify for the WC and Olympics through NCAA competitions in addition to the impact that this could have on American Track and Field. Maybe someone more informed than I am can comment.